Publications

  1. Walweel,A. U. Kutlu, U. Yilmaz, Z. Al-Shaebi, J. Charmi, M. Molaparast, M. Salehiabar, O. Aydin, “Review: mRNA Delivery Systems in Vaccinations and Other Therapeutic Applications”, Submitted.
  2. Aydin,G. Tiruchinapally, I. Youssef, H. Ramaraju, Y. Y. Durmaz, K. M. Kozloff, D. H. Kohn, and M. E. H. ElSayed, “Differential Targeting of Prostate Cancer Cells, Osteoblasts, and Osteoclasts using pVTK Peptide- and Bisphosphonate-Functionalized Micelles”, Submitted.
  3. B Kip and Aydin, “Overcome of cisplatin drug resistance in ovarian cancer by combination of low-intensity ultrasound and cisplatin”, Under Review.
  4. I. Han, C. U. Tunc, P. Atalay, O. Erdogan, G. Unal, M. Bozkurt,O. Aydin,O Cevik, and S. G. Kucukguzel,“Synthesis, characterization, in vitro and in vivo anticancer activity studies of new (S)-Naproxen thiosemicarbazide/1,2,4-triazole derivatives”Under Review.
  5. H. Arslan, F. U. Ciloglu, U. Yilmaz, E. Simsek, and O. Aydin,“Discrimination of waterborne pathogens, Cryptosporidium parvum oocysts and bacteria using surface-enhanced Raman spectroscopy coupled with principal component analysis and hierarchical clustering”, Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 267 (1), 120475, 2022.
  6. U. Ciloglu, A. Caliskan, A. M. Saridag, I. H. Kilic, M. Tokmakci, M. Kahraman, and O. Aydin,“Drug-resistant Staphylococcus aureus bacteria detection with the combination of surface-enhanced Raman spectroscopy and deep learning techniques”, Scientific Report, 11 (1), 1-12, 2021.
  7. Aydin, “Development of pH-sensitive cross-linked micelles for drug delivery”, Journal of Research in Pharmacy, 25(4): 359-3702021.
  8. I. Han, P. Atalay, C. U. Tunc, G. Unal, S. Dayan, O. Aydin, and S. G. Kucukguzeli,“Devolopment of Novel Naproxen Hydrazide-hydrazones as Potent VEGFR-2 Inhibitors and Their Evaluation in vitro/in vivo”Bioorganic & Medicinal Chemistry, 37, 1, 1160972021.
  9. Cohen, P. Chandran, R. Lorsung, O. Aydin, L.Tomlinson, R. Rosenblatt,S.R. Burks, and J.A. Frank, “Pulsed focused ultrasound slows B16 melanoma and 4T1 breast tumor growth through differential tumor microenvironmental changes”, Cancers, 13(7), 1546, 2021.
  10. U. Ciloglu, A. M. Saridag, I. H. Kilic, M. Tokmakci, M. Kahraman, and O. Aydin, “Identification of methicillin-resistant Staphylococcus aureus bacteria using surface-enhanced Raman spectroscopy and machine learning techniques” Analyst, 23, 7559-7570, 2020.
  11. Ilk, A. Ramanauskaitė, B. K. Bilican, P. Mulerčikas, D. Cam, M. S. Onses, I. Torun, S. Kazlauskaitė, V. Baublys, O. Aydin, L. S. Zang, and M. Kaya, “Usage of natural chitosan membrane obtained from insect corneal lenses as a drug carrier and its potential for point of care tests”, Materials Science & Engineering C, 112, 110897, 2020.
  12. Aydin,P.Chandran,Rebecca M. Lorsung, G. Cohen, S.R. Burks, and J.A. Frank, “The Proteomic Effects of Pulsed Focused Ultrasound on Tumor Microenvironments of Murine Melanoma and Breast Cancer Models”, Ultrasound in Medicine and Biology, 2019.
  13. Aydin,E. Vlaisavljevich, Y. Y. Durmaz, M. ElSayed, Z. Xu,“Non-invasive Ablation of Prostate Cancer Spheroids Using Acoustically-Activated Nano-Droplets”, Molecular. Pharmaceutics,13 (12), 4054–40652016.
  14. Aydin,I. Youssef, Y. Y. Durmaz, G.Tiruchinapally, and M. E. H. ElSayed, “Formulation of Acid-Sensitive Micelles for Delivery of Cabazitaxel into Prostate Cancer Cells”Molecular Pharmaceutics, 13(4), 1413–14292016.
  15. Vlaisavljevich, O. Aydin, Y. Y. Durmaz, K-W Lin, B. Fowlkes, Z. Xu, and M. ElSayed“TheEffects of DropletComposition on Nanodroplet-MediatedHistotripsy”Ultrasound in Medicine and Biology42(4), 931, 2016.
  16. Vlaisavljevich, O. Aydin, Y. Y. Durmaz, K-W Lin, B. Fowlkes, M. ElSayed, and Z. Xu “The Role of PositiveandNegativePressure on CavitationNucleation in Nanodroplet-MediatedHistotripsy”Phys. Med. Biol, 30, 61(2), 663-682,2015.
  17. Vlaisavljevich, O. Aydin, Y. Y. Durmaz, K-W Lin, B. Fowlkes, M. ElSayed, and Z. Xu “The Effects of Ultrasound Frequency on Nanodroplet-Mediated Histotripsy”Ultrasound in Medicine and Biology, 41(8), 2135, 2015.
  18. Culha, O. F. Karatas, O. Aydin, M. Kahraman, K. Keseroğlu, I. Sayin, O. F. Bayrak “Towards PCR-free Mutation Detection Based on Surface-enhanced Raman Scattering”Proc. SPIE Vol. 7192, 719205, 2009.
  19. Aydın, M. Altaş, M. Kahraman, O. F. Bayrak, M. Çulha, “Surface-enhanced Raman Scattering of Healthy Brain Tissue and Tumors”Applied Spectroscopy, 63(10), 1095-1100, 2009.
  20. Aydın, M. Kahraman, E. Kılıç, M. Çulha, “Surface-Enhanced Raman Scattering of Rat Tissues”Applied Spectroscopy, 63(6), 662-668, 2009
  21. Kahraman, O. Aydın, M. Çulha, “Oligonucleotide Mediated Ag- Au Core-Shell Nanoparticles”Plasmonics, 4(4), 293-301, 2009.
  22. F. Karataş, E. Sezgin, O. Aydın, M. Culha, “Surface enhancement Raman Scattering of Mitochondria and its Behavior in Collodial Environment”Colloids and Surfaces B: Biointerfaces.71(2), 315-318, 2009.
  23. Kahraman, O. Aydın, M. Çulha, “Size Effect of 3D Aggregates Assembled from Silver Nanoparticles on Surface Enhanced Raman Scattering”ChemPhysChem. 10(3), 537-542, 2009.

BOOK CHAPTERS

  1. Omer Aydin, Ummugulsum Yilmaz, Dilek Kanarya, Cansu Umran Tunc, “Determination of Optimum Ratio of Cationic Polymers and Small Interfering RNA withAgarose Gel Retardation Assay” Book Chapter in Methods in Molecular Biology, Springer Nature, Switzerland, 2021.
  2. Mustafa Çulha, Mehmet Kahraman, Omer Faruk Karatas, Aydın, “Encyclopedia of Nanoscience and Nanotechnology, Chapter: Nanoplasmonics in biosensing and nanobiomedicine”, Book Chapter inEncyclopedia of Nanoscience and Nanotechnology American Scientific Publishers, California USA, (Ed:H. S. Nalwa)2009.
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